CaImAn documentationΒΆ
Contents:
- Overview
- Caiman Features
- Installation and Updating
- Getting Started
- Handling movies
- Performance Guide
- General Tips
- File Formats
- File Formats: Addenda
- Graphical interfaces
- CaImAn and GPUs
- On Clustering
- Core Functions
- Movie Handling
- Timeseries Handling
- Motion Correction
- Estimates
- Deconvolution
- Parameter Setting
- CNMF
- Online CNMF (OnACID)
- Preprocessing
- Initialization
- Spatial Components
- Temporal Components
- Merge components
- Utilities
- ROIs
- Memory mapping
- Image statistics
- Parallel Processing functions
- Ring-CNN functions
- VolPy